Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs72758530 | chr15:67066239 | A/G | 1.97E-5 | 173 | 15.57 | 13.07 | 3.9 | KM Plot |
| PAAD | rs72759703 | chr1:235533174 | C/T | 1.28E-7 | 175 | 15.43 | 14.03 | 3.17 | KM Plot |
| PAAD | rs7276092 | chr21:48063735 | G/C | 5.34E-5 | 176 | 7.47 | 15.62 | 15.4 | KM Plot |
| PAAD | rs72794092 | chr5:141266961 | T/C | 3.03E-5 | 174 | 15.42 | 15.87 | 3.9 | KM Plot |
| PAAD | rs7282712 | chr21:48065697 | T/C | 5.34E-5 | 176 | 7.47 | 15.62 | 15.4 | KM Plot |
| PAAD | rs72838318 | chr5:167718060 | T/A | 1.28E-7 | 171 | 15.62 | 12.98 | 3.17 | KM Plot |
| PAAD | rs72838326 | chr5:167723152 | C/T | 1.28E-7 | 171 | 15.62 | 12.98 | 3.17 | KM Plot |
| PAAD | rs72841123 | chr2:70350961 | G/A | 0 | 173 | 15.42 | 18.43 | 1.03 | KM Plot |
| PAAD | rs72841129 | chr2:70410527 | C/G | 0 | 174 | 15.4 | 18.43 | 1.03 | KM Plot |
| PAAD | rs72841130 | chr2:70412557 | A/G | 0 | 174 | 15.37 | 19.47 | 1.03 | KM Plot |
| PAAD | rs72841131 | chr2:70414741 | T/C | 0 | 178 | 15.33 | 18.43 | 1.03 | KM Plot |
| PAAD | rs72841136 | chr2:70425096 | C/T | 0 | 178 | 15.37 | 17.4 | 1.03 | KM Plot |
| PAAD | rs72841140 | chr2:70430623 | T/G | 0 | 177 | 15.33 | 17.4 | 1.03 | KM Plot |
| PAAD | rs72841142 | chr2:70440448 | C/A | 0 | 176 | 15.37 | 19.47 | 1.03 | KM Plot |
| PAAD | rs72841145 | chr2:70441361 | G/A | 0 | 178 | 15.33 | 18.43 | 1.03 | KM Plot |